Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015909278.1_cds_XP_016459496.1_53021
CDS Infomation

[gene=LOC107783049] [db_xref=GeneID:107783049] [protein=DNA-dependent metalloprotease WSS1-like] [protein_id=XP_016459496.1] [location=complement(join(51584..51775,52396..53073,54587..54782,54876..55033))] [gbkey=CDS]
Sequence

ATGAATTTGGGGGATCTAAACAAGGTATGGGAAATCAAAGCTCTGAAGCGAAAACCCAAA
CATGAAGAGGCCACCAAGATTCTTGAGAGAATTGCTAAACAGGTTCAGCCCATTATGCGT
AAGCATAATTGGAGAGTCAAACTTTTATCTGAATTCTGCCCGAAAAGACCAGCGCTATTG
GGGTTAAATGTAGGAGCGGGTATACATGTAAAGCTGAGGCTTCGAAGGCCCAACAATGAT
GAGCAATTTTACCCATACAATGAAGTTCTGGATACTATGCTTCATGAACTTTGCCATAAC
ACTCATGGTCCGCACAATGCCAGTTTCTACAGGCTCTGGGATGAAATTAGAAAGGAATGT
GAAGATTTAATGACTAAAGGGATAAGTGGCACAGGAGAAGGGTTTGATCTCCCTGGAAGA
CGATTAGGGGGCCTTTTCCCACAGCCATCTATATCATCTCTCCGCCAAACTGCAGCTGCT
GCTGCTGAAAATAGAGCACGTCTTAAGTTGTTGCTACCATCTGGGCCTAGACGTCTGGGT
GGTGACCATTCTATCAAGTCTGCACTTACTCCAATTCAAGCTGCAGCAATGGCTGCAGAA
AGGAGATTACAGGATAATATTTGGTGTGGCTCTGAATCATGTGACTTATCTGACATTGAT
GAAAATTCTAATTCATTGCCTGAGCCTTTGCCACCACAGCATACTTCTGATAGACCCGAG
ACTCCTAATGGGTTTGATGCACTGTCTTCTAAGGTAACATCTCGTAAAAGAAGTCGAGAA
TCGAATTCTATATCATCCTCAAGGTCCTTGCATGGCACTAAGCCCCTGCCTAACCACGAC
AAAGAAATTGCTCGCAAAGTTGGTCAGGCAGAAGGGACTTTTCATACCGTGCCATCAAGG
GGTTATCCAGGGTCCTTTGTTGATTTAAGTGGAAATGCTTCAAGTTCTACATCCATGCAT
GGCCATGATGACTTACACGGTCCCGAGGAACCAATGATGTGGGAGTGTTTAATGTGCACT
TTGTTGAACCCACCATTGGCTCCTGTATGTAAGCTTTGTCAAAACCAAAAGCCCAAAGAT
GTGGATGACAGAAATAGTATGTGGTCATGCAAGCTCTGTACGCTGGATAACAGTCTGAAG
TTGGATCACTGCACAGCCTGTGGAGAGTGGAGATATTCTCATGGCCCTCCTATTGCAACA
CCAGCACCCAATCTTGGCACCTGA

Peptide Sequence

PEP ID

XP_016459496.1
PEP Infomation

PREDICTED: DNA-dependent metalloprotease WSS1-like [Nicotiana tabacum]
Sequence

MNLGDLNKVWEIKALKRKPKHEEATKILERIAKQVQPIMRKHNWRVKLLSEFCPKRPALL
GLNVGAGIHVKLRLRRPNNDEQFYPYNEVLDTMLHELCHNTHGPHNASFYRLWDEIRKEC
EDLMTKGISGTGEGFDLPGRRLGGLFPQPSISSLRQTAAAAAENRARLKLLLPSGPRRLG
GDHSIKSALTPIQAAAMAAERRLQDNIWCGSESCDLSDIDENSNSLPEPLPPQHTSDRPE
TPNGFDALSSKVTSRKRSRESNSISSSRSLHGTKPLPNHDKEIARKVGQAEGTFHTVPSR
GYPGSFVDLSGNASSSTSMHGHDDLHGPEEPMMWECLMCTLLNPPLAPVCKLCQNQKPKD
VDDRNSMWSCKLCTLDNSLKLDHCTACGEWRYSHGPPIATPAPNLGT

Transcript Sequence

Gene sequence data has not been registered.